ABC News July 26, 2018

711 migrant children will not be reunited with parents, guardians by deadline, officials say

WATCH: Hundreds of immigrant children in limbo despite court's deadline

All eligible migrant children who have been separated from their parents at the U.S. border will be reunited with their parents by the end of the day, a Department of Homeland Security official told ABC News.

However, there are still 711 children who are not being reunited with parents, guardians or sponsors.

By Thursday evening, 1,820 children had been discharged from U.S. Department of Health & Human Services custody, the official said. Of those children, 1,442 were reunited with their parents in U.S. Immigration and Customs Enforcement custody, and 378 children were released to other guardians or sponsors in the U.S., the official said.

Handout/AFP via Getty Images
This US Customs and Border Protection photo obtained June 18, 2018, shows intake of illegal border crossers by U.S. Border Patrol agents at the Central Processing Center in McAllen, Texas on May 23, 2018.

The Trump administration is facing a court-ordered deadline to reunite more than 2,500 immigrant children by day's end. A total of 1,637 parents were ruled "eligible" for reunification at a status conference in San Diego before District Judge Dana Sabraw on Tuesday.

(MORE: 1,012 migrant parents reunited with children after latest hearing, US says)

About 463 parents of children still in government custody are no longer in the United States, according to government attorneys. In addition, parents have not been identified for 37 children, the government said, adding that some of those children may be unaccompanied minors who were classified incorrectly.

John Moore/Getty Images
A two-year-old Honduran girl cries as her mother is searched and detained near the U.S.-Mexico border on June 12, 2018, in McAllen, Texas.

Most of the reunifications are taking place in Karnes, Texas, according to the government.

(MORE: 'Not knowing anything about my daughter is torture,' say father separated at border)

Earlier this year, the Trump administration enacted a "zero-tolerance" immigration policy on people entering the U.S. illegally.

John Moore/Getty Images, FILE
Central American asylum seekers wait as U.S. Border Patrol agents take them into custody, June 12, 2018 near McAllen, Texas. The families were then sent to a U.S. Customs and Border Protection (CBP) processing center for possible separation. U.S. border authorities are executing the Trump administration's "zero tolerance" policy towards undocumented immigrants. U.S. Attorney General Jeff Sessions also said that domestic and gang violence in immigrants' country of origin would no longer qualify them for political asylum status.

The children who were reunited with their families were ages 5 and over, according to a Department of Justice court filing obtained by ABC News.

(MORE: Guatemalan child separated from father at border reunited with family after 8 months )

Many of the children have not seen their parents in weeks or months, according to the AP.

The government and the ACLU are scheduled to be back in court in San Diego on Friday.

(MORE: New York to sue Trump administration over policy of separating families)

ABC News' Lauren Pearle contributed to this report.